Posters

Practical universal k-mer sets for minimizer schemes
Dan DeBlasio, Fiyinfoluwa Gbosibo, Carl Kingsford, Guillaume Marçais (pdf)
Poster presented at ISMB 2019, Basel, Switzerland.

 

Automatically eliminating errors induced by suboptimal parameter choices in transcript assembly
Dan DeBlasio, Kwanho Kim, and Carl Kingsford (pdf)
Poster presented at ISMB 2018, Chicago, IL,
2018 Workshop on Emerging Methods for Sequence Alignment, State College, PA,
ECCB 2018, Athens, Greece, and FAB 2018.

Bioinformatics Internships Program
Anupama Jigisha, Margherita Francescatto, Farzana Rahman, Nazeefa Fatima, Alberto Santos, Pandurang Kolekar, Avinash Kumar Shanmugam, Venkata Satagopam, Dan DeBlasio, Magali Michaut, Emre Guney (pdf)
F1000 Outstanding Poster Presentation Winner — ISMB 2018, Chicago, IL

Adaptive Local Realignment via Parameter Advising
Dan DeBlasio and John Kececioglu (pdf)
Poster presented at ISMB 2016, Orlando, FL,
ISCB Student Council Symposium 2016, Orlando, FL
WABI 2016, Aarhus, Denmark,
and ACM-BCB 2016, Seattle, WA

Ensemble Multiple Sequence Alignment using Advising
Dan DeBlasio and John Kececioglu (pdf)
Poster presented at ISMB 2015, Dublin, Ireland
and ISCB Student Council Symposium 2015, Dublin, Ireland

Learning Parameter Sets for Alignment Advising
Dan DeBlasio and John Kececioglu (pdf)
Poster presented at ACM-BCB 2014, Newport Beach, CA.

Learning Advisors for Multiple Sequence Alignment
Dan DeBlasio and John Kececioglu (pdf)
Poster presented at ISMB 2014, Boston, Mass.
and ISCB Student Council Symposium 2014, Boston, Mass.

FACET: a feature-based accuracy-estimation tool for protein multiple sequence alignments
Dan DeBlasio and John Kececioglu (pdf)
Poster presented at ISMB 2013, Berlin, Germany
ISCB Student Council Symposium 2013, Berlin, Germany
MAGE 2013, Bromont,Quebec, Canada, and
University of Arizona, IGERT Symposium on Deep Genomics, April 2014.

Improving the Quality of Protein Sequence Alignments by Estimating their Accuracy
Dan DeBlasio and John Kececioglu (pdf) (video) (long video)
Poster presented in IGERT poster competition 2013.

Alignment Accuracy Without a Reference
Dan DeBlasio, Travis Wheeler, Vadimir Filkov, and John Kececioglu (pdf)
Poster presented at ISMB 2011, Vienna, Austria.

A New Approach to Multiple RNA Structure Alignment
Daniel DeBlasio, Jocelyne Bruand, Vineet Bafna, Shaojie Zhang. (jpg)
Poster presented at RECOMB 2009. Tucson, AZ